[HTML][HTML] Examining heterogeneity of stromal cells in tumor microenvironment based on pan-cancer single-cell RNA sequencing data

W Wang, L Wang, J She, J Zhu - Cancer Biology & Medicine, 2022 - ncbi.nlm.nih.gov
Tumor tissues contain both tumor and non-tumor cells, which include infiltrated immune cells
and stromal cells, collectively called the tumor microenvironment (TME). Single-cell RNA …

[HTML][HTML] TMExplorer: a tumour microenvironment single-cell RNAseq database and search tool

E Christensen, A Naidas, D Chen, M Husic… - Plos one, 2022 - journals.plos.org
Motivation The tumour microenvironment (TME) contains various cells including stromal
fibroblasts, immune and malignant cells, and its composition can be elucidated using single …

Integration of Pan-Cancer Single-Cell and Spatial Transcriptomics Reveals Stromal Cell Features and Therapeutic Targets in Tumor Microenvironment

Y Du, J Shi, J Wang, Z Xun, Z Yu, H Sun, R Bao… - Cancer Research, 2024 - AACR
Stromal cells are physiologically essential components of the tumor microenvironment
(TME) that mediates tumor development and therapeutic resistance. Development of a …

[HTML][HTML] A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling

J Qian, S Olbrecht, B Boeckx, H Vos, D Laoui… - Cell research, 2020 - nature.com
The stromal compartment of the tumor microenvironment consists of a heterogeneous set of
tissue-resident and tumor-infiltrating cells, which are profoundly moulded by cancer cells. An …

[HTML][HTML] New insights from the single-cell level: Tumor associated macrophages heterogeneity and personalized therapy

X Wang, Y Xu, Q Sun, X Zhou, W Ma, JB Wu… - Biomedicine & …, 2022 - Elsevier
Tumor-associated macrophages (TAMs) are important immune cells in the tumor
microenvironment, and their invasion in tumors is closely related to poor prognosis …

[HTML][HTML] Potentiality of multiple modalities for single-cell analyses to evaluate the tumor microenvironment in clinical specimens

Y Kashima, Y Togashi, S Fukuoka, T Kamada, T Irie… - Scientific reports, 2021 - nature.com
Single-cell level analysis is powerful tool to assess the heterogeneity of cellular components
in tumor microenvironments (TME). In this study, we investigated immune-profiles using the …

Profiling transcriptional heterogeneity of epithelium, fibroblasts, and immune cells in esophageal squamous cell carcinoma by single‐cell RNA sequencing

K Shi, Y Li, L Yang, Z Zhang, D Guo… - The FASEB …, 2022 - Wiley Online Library
Esophageal squamous cell carcinoma (ESCC) is one of the most aggressive malignancies
with complex tumor microenvironment (TME) which has been proven to be associated with …

Cancer biology deciphered by single-cell transcriptomic sequencing

Y Li, J Jin, F Bai - Protein & Cell, 2022 - academic.oup.com
Tumors are complex ecosystems in which heterogeneous cancer cells interact with their
microenvironment composed of diverse immune, endothelial, and stromal cells. Cancer …

scCancer2: data-driven in-depth annotations of the tumor microenvironment at single-level resolution

Z Chen, Y Miao, Z Tan, Q Hu, Y Wu, X Li, W Guo… - …, 2024 - academic.oup.com
Single-cell RNA-seq (scRNA-seq) is a powerful technique for decoding the complex cellular
compositions in the tumor microenvironment (TME). As previous studies have defined many …

[HTML][HTML] The application of single-cell RNA sequencing in the inflammatory tumor microenvironment

J Zhao, Y Shi, G Cao - Biomolecules, 2023 - mdpi.com
The initiation and progression of tumors are complex. The cancer evolution-development
hypothesis holds that the dysregulation of immune balance is caused by the synergistic …