Table1

Examples of commercially available cancer panels

CompanyPanel nameNumber of genesCoverageNote
Life sciencesIon ampliSeq hotspot cancer panel50None indicatedCompatible with FFPE sample
Life sciencesIon ampliSeq comprehensive cancer panel409None indicatedDetect CNV; compatible with FFPE sample
IlluminaTruSight cancer panel9420×Germline only
IlluminaTruSight tumor 15 panel15≥500×Solid tumor somatic variants
IlluminaTruSight amplicon cancer panel48~1000×Somatic mutational hotspots
IlluminaTruSight RNA pan-cancer panel21,043 exonic region3 million reads per sampleGene expression, variant and fusion detection in 1,385 cancer associated genes
IDTxGen® pan-cancer panel127>97% of targeted covered at 30× Can be expanded by adding custom probes