Examples of commercially available cancer panels
Company | Panel name | Number of genes | Coverage | Note |
Life sciences | Ion ampliSeq hotspot cancer panel | 50 | None indicated | Compatible with FFPE sample |
Life sciences | Ion ampliSeq comprehensive cancer panel | 409 | None indicated | Detect CNV; compatible with FFPE sample |
Illumina | TruSight cancer panel | 94 | 20× | Germline only |
Illumina | TruSight tumor 15 panel | 15 | ≥500× | Solid tumor somatic variants |
Illumina | TruSight amplicon cancer panel | 48 | ~1000× | Somatic mutational hotspots |
Illumina | TruSight RNA pan-cancer panel | 21,043 exonic region | 3 million reads per sample | Gene expression, variant and fusion detection in 1,385 cancer associated genes |
IDT | xGen® pan-cancer panel | 127 | >97% of targeted covered at 30× | Can be expanded by adding custom probes |