Table 2.

Table of polymorphisms for the HLA-DQA1 gene

Variant No.	Nucleotide Change	Effect	RE Gained in Variant	RE Lost from Reference	PSSM Difference	SIFT Score	Description	Zygosity
1	C3977T	R70W		Acil	20	0.01	rs9272693	Homo
2	A3987T	E73V		BseMII, Ddel	8.1	0.2	rs9272696	Homo
3	G3988T	E73D		BseMII, Ddel	2.5	0.51	rs9272697	Homo
4	A3995C	K76Q	CviJI	Apol	-0.1	0.36	rs9272700	Homo
5	G4019T	G84C	BtsI,TspRI		15.1	0.12	rs9272703	Homo
6	G4020T	G84V	BspMI	ApaLI, BseSI, HgiAI, MjaΓV, Sdul	9.3	0.4	rs9272704	Homo
7	C4044T	A92V					rs9272709	Homo
8	C4051T	H94=					rsl0480087	Homo
9	A4053C	N95T					rs1048089	Homo
10	A4058G	N97D					rsl048090	Homo
11	A4077C	Y103S	Mtnel		0	0.99	rs92727ll	Homo
12	C4571T	T130I	FokI		5.7	0.28	rs9272745	Homo
13	A5226G	M230V	Bsil	Nlal¤			rs9272789	Homo
14	A5300C	P254=	Apal, BseSI, Drall, HgiJII, NlalV, Sdul				rs9272794	Homo

Table of polymorphisms for the HLA-DQA1 gene shown in Table 2. The restriction enzyme names link to the entries in REBASE, describing commercial availability and ¡soschizomers. Descriptions are extracted from the dbSNP database. The last column shows the zygosity of the change, if a variant had been entered using an ambiguous nucleotide, this ∞lumn would read ‘hetero’.